【SGE】 Using Sun Grid Engine (SGE) in Rocks

• To submit a serial program filename.out to SGE,
  
  Step 1. Make a sh file (call it "filename_sh.sh"), which contains:
  
  #!/bin/bash
  #
  #$ -cwd
  #$ -j y
  #$ -S /bin/bash
  #
  ./filename.out
  
  
  
  Step 2. Then, input the following in the command line:
  
  $ qsub filename_sh.sh
  
  
  In this case, output files are saved in the current folder. Messages displayed in the terminal in usual case are saved in "filename_sh.sh.ox" file.



• To delete a job (let "id" denote the corresponding job ID) submitted but not being executed, command the following:
  
  $ qdel id
  



• To delete a job (let "id" denote the corresponding job ID) being executed, command the following:
  
  $ qdel -k id